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EURAXESS

PhD Student in Theoretical and Computational Biophysics

The Human Resources Strategy for Researchers
28 Oct 2022

Job Information

Organisation/Company
Nicolaus Copernicus University
Department
Faculty of Physics, Astronomy and Informatics
Research Field
Physics
Physics » Biophysics
Physics » Chemical physics
Physics » Computational physics
Physics » Statistical physics
Researcher Profile
First Stage Researcher (R1)
Country
Poland
Application Deadline
Type of Contract
Temporary
Job Status
Full-time
Hours Per Week
40
Is the job funded through the EU Research Framework Programme?
Not funded by an EU programme
Is the Job related to staff position within a Research Infrastructure?
No

Offer Description

The Ph.D. student position is offered under the project entitled "Statistical Learning of Slow Collective Variables from Atomistic

Simulations," led by Dr. Jakub Rydzewski at the Institute of Physics, Nicolaus Copernicus University in Toruń, Poland. The project is financed by National Science Center in Poland (Sonata).

Modeling the long-timescale dynamics of biophysical and molecular systems is a fundamental task in the physical sciences. Molecular

dynamics (MD) simulations enable studying complex processes on microscopic spatiotemporal scales. However, such complex processes are often characterized by thousands of degrees of freedom which is very difficult to analyze in practice.

In this project, a machine-learning method will be devised to select a small number of physically-valid degrees of freedom in a near-blind manner improving the analysis of MD simulations. This method will be applicable to long-timescale processes in chemistry, physics, and biology.

Requirements

Research Field
Physics
Education Level
Bachelor Degree or equivalent
Skills/Qualifications

• Basic knowledge about molecular dynamics simulations

• Programming (e.g., C++, Python) is an advantage.

Specific Requirements

Have the qualification for being enrolled to the Doctoral School called Academia Scientiarum Thoruniensis (AST) at Nicolaus Copernicus

University (https://www.phd.umk.pl/ast/).

Languages
ENGLISH
Level
Good

Additional Information

Benefits

• The Ph.D. stipend in the project is 5000 PLN (~1040 euro)/month (much higher than standard stipend for PhD students in Poland) for 36 months.

• Opportunity to train and develop in a rapidly developing research area

• Access to vast computing infrastructure, new notebook

• Participation in scientific or skills courses, conferences, and R&D

trainings.

Eligibility criteria

• Required education level: Master’s degree (or equivalent) in physics, chemistry, computer science, or similar

• Required languages: English

Selection process

Required documents:

• Curriculum vitae

• Scan of the master's degree diploma

• Cover letter

Applications received before November 30, 2022 will be given full consideration, but will continue to be accepted until the position is

filled. Selected applicants will be asked to participate in interviews held in the NCU or via teleconference call.

Additional comments

Please include the following statement in your application: “I hereby give consent for my personal data included in my application to be processed for the purposes of the recruitment process under the Personal Data Protection Act as of 10 May 2018 (consolidated text: Journal of Laws 2019, item 1781) and pursuant to art. 6 § 1a GDPR (General Data Protection Regulation - EU 2016/279)."

Work Location(s)

Number of offers available
1
Company/Institute
Nicolaus Copernicus University
Country
Poland
City
Toruń
Postal Code
87-100
Street
ul. Grudziądzka 5/7
Geofield

Where to apply

E-mail
jr@fizyka.umk.pl

Contact

City
Toruń
Website
Street
ul. Grudziądzka 5/7
Postal Code
87-100